| Rank | School/City/State | Final 2003 Record |
| 1 | Riverside (Greer, S.C.) | 29-1 |
| 2 | Nova (Davie, FL) | 28-4 |
| 3 | La Cueva (Albuquerque, N.M.) | 29-0 |
| 4 | Bellaire (Bellaire, TX) | 30-4 |
| 5 | Chatsworth (Chatsworth, CA) | 33-1 |
| 6 | Reno (Reno, NV) | 36-2 |
| 7 | Destrehan (Destrehan, LA) | 28-7 |
| 8 | La Costa Canyon (Carlsbad, CA) | 32-1 |
| 9 | Owasso (Owasso, OK) | 36-4 |
| 10 | Edwardsville (Edwardsville, IL) | 34-5 |
| 11 | Farragut (Knoxville, TN) | 48-1 |
| 12 | Junius Rose (Greenville, NC) | 26-2 |
| 13 | Male (Louisville, KY) | 27-11 |
| 14 | Tottenville (Staten Island, NY) | 36-2 |
| 15 | Christopher Columbus (Miami, FL) | 27-7 |
| 16 | Clay-Calkville (Pinson, AL) | 36-5 |
| 17 | Germantown Academy (PA) | 25-6 |
| 18 | Christian Brothers (Memphis, TN) | 30-9 |
| 19 | George Washington (New York, NY) | 35-5 |
| 20 | Columbus (Columbus, GA) | 31-8 |
| 21 | Mission Bay (San Diego, CA) | 28-6 |
| 22 | Hamilton (Chandler, AZ) | 29-10 |
| 23 | Westhill (Syracuse, NY) | 18-5 |
| 24 | Woodinville (Woodinville, WA) | 23-4 |
| 25 | Norwich Academy (Norwich, CT) | 23-2 |
| 26 | Bishop Hendricken (Warwick, RI) | 28-2 |
| 27 | St. Xavier (Cincinnati, OH) | 24-9 |
| 28 | Papillon-La Vista (Papillon, NE) | 20-8 |
| 29 | Green Valley (Henderson, NV) | 29-8 |
| 30 | Brownsburg (Brownsburg, IN) | 30-3 |